Information for 8-ATGAATTT (Motif 34)

C G T A A C G T C T A G C G T A C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A C G T A G T C C G T A A C G T
p-value:1e-26
log p-value:-6.121e+01
Information Content per bp:1.958
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets99.7 +/- 59.5bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.80
Offset:-6
Orientation:reverse strand
Alignment:------ATGAATTT
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T C T A G C G T A C G T A A C G T A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

tll/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:ATGAATTT
-TTAATTT
 C G T A A C G T C T A G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A A C G T A C G T A C G T

PB0171.1_Sox18_2/Jaspar

Match Rank:3
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---ATGAATTT-----
NNNNTGAATTCANNNC
 A C G T A C G T A C G T C G T A A C G T C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

CG17838(RRM)/Drosophila_melanogaster-RNCMPT00131-PBM/HughesRNA

Match Rank:4
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:ATGAATTT-
--AAATTTC
 C G T A A C G T C T A G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A C G T A C G T A A C G T A C G T A C G T T A G C

abd-A/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.76
Offset:0
Orientation:forward strand
Alignment:ATGAATTT
ATTAATT-
 C G T A A C G T C T A G C G T A C G T A A C G T A C G T A C G T
T C G A G C A T G C A T G T C A C G T A G C A T A C G T A C G T

HNRNPR(RRM)/Gallus_gallus-RNCMPT00288-PBM/HughesRNA

Match Rank:6
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:ATGAATTT--
---AATTTGG
 C G T A A C G T C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C T G A C T G

PB0170.1_Sox17_2/Jaspar

Match Rank:7
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAATTT----
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0068.1_Sox1_1/Jaspar

Match Rank:8
Score:0.71
Offset:-5
Orientation:reverse strand
Alignment:-----ATGAATTT---
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

SUM1/MA0398.1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATGAATTT-
AAAAATTTT
 C G T A A C G T C T A G C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G T A C G T A C G T A C G T A A C G T C G A T C G A T C G A T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.71
Offset:0
Orientation:forward strand
Alignment:ATGAATTT--
ATGAATATTC
 C G T A A C G T C T A G C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C