Information for 9-GGTWSAAA (Motif 36)

T C A G A T C G A C G T G C T A A T C G G C T A C G T A C G T A
Reverse Opposite:
G C A T C G A T C G A T T A G C C G A T C G T A A T G C A G T C
p-value:1e-26
log p-value:-6.035e+01
Information Content per bp:1.715
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets103.5 +/- 55.3bp
Average Position of motif in Background157.8 +/- 42.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AT1G76880(Trihelix)/col-AT1G76880-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GGTWSAAA
ACGGTAAAAW
 A C G T A C G T T C A G A T C G A C G T G C T A A T C G G C T A C G T A C G T A
T C G A G T A C T C A G A C T G A C G T C G T A C G T A C G T A C G T A G C T A

ct/MA0218.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGTWSAAA
-GTTCAA-
 T C A G A T C G A C G T G C T A A T C G G C T A C G T A C G T A
A C G T A T C G G C A T A C G T A G T C C T G A C T G A A C G T

AT5G47660(Trihelix)/colamp-AT5G47660-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGTWSAAA-
CGGTAAAAWT
 A C G T T C A G A T C G A C G T G C T A A T C G G C T A C G T A C G T A A C G T
A T G C C T A G A C T G A C G T C G T A C G T A G T C A C G T A C G T A C G A T

GTL1(Trihelix)/colamp-GTL1-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GGTWSAAA
RMGGTAAAWW
 A C G T A C G T T C A G A T C G A C G T G C T A A T C G G C T A C G T A C G T A
T C G A T G A C C T A G C T A G A C G T C G T A C G T A G C T A C G T A C G A T

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGTWSAAA-
NNGTTCAAGN
 A C G T T C A G A T C G A C G T G C T A A T C G G C T A C G T A C G T A A C G T
A C G T A C G T A T C G G C A T A C G T A G T C C T G A C T G A A T C G G T A C

GT1(Trihelix)/Nicotiana tabacum/AthaMap

Match Rank:6
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GGTWSAAA
AAATGGTAAAAA
 A C G T A C G T A C G T A C G T T C A G A T C G A C G T G C T A A T C G G C T A C G T A C G T A
C T G A C G T A C T G A C G A T C T A G A C T G C G A T C G T A C G T A G C T A C G T A G C T A

EMB1789(C3H)/col-EMB1789-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GGTWSAAA
HNRCGGTAAAWA
 A C G T A C G T A C G T A C G T T C A G A T C G A C G T G C T A A T C G G C T A C G T A C G T A
G T C A G T C A C T G A T G A C T C A G A C T G A C G T C G T A C G T A G C T A C G A T C T G A

Unknown3/Arabidopsis-Promoters/Homer

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGTWSAAA
CCGGTTTART
 A C G T A C G T T C A G A T C G A C G T G C T A A T C G G C T A C G T A C G T A
G A T C A T G C A T C G C A T G A C G T G A C T G A C T C T G A C T G A G C A T

GT2(Trihelix)/colamp-GT2-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GGTWSAAA--
AMGGTAAAWWWN
 A C G T A C G T T C A G A T C G A C G T G C T A A T C G G C T A C G T A C G T A A C G T A C G T
C T G A G T A C C T A G C T A G A C G T C G T A C G T A C G T A C G T A G C T A G C A T C G T A

OPI1/MA0349.1/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGTWSAAA
CGGTTCG--
 A C G T T C A G A T C G A C G T G C T A A T C G G C T A C G T A C G T A
A G T C A C T G A C T G A C G T A C G T A G T C A T C G A C G T A C G T