Information for 12-ATACACAG (Motif 39)

C G T A A C G T C G T A A G T C C G T A A G T C C T G A A C T G
Reverse Opposite:
A G T C A G C T C T A G A C G T A C T G C G A T C G T A A C G T
p-value:1e-23
log p-value:-5.501e+01
Information Content per bp:1.936
Number of Target Sequences with motif68.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets101.7 +/- 57.3bp
Average Position of motif in Background81.7 +/- 52.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SM(RRM)/Drosophila_melanogaster-RNCMPT00069-PBM/HughesRNA

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:ATACACAG
ACACACA-
 C G T A A C G T C G T A A G T C C G T A A G T C C T G A A C T G
C G T A A T G C C G T A A G T C C T G A T G A C T G C A A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----ATACACAG
TCCAATCCACA-
 A C G T A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A G T C C T G A A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

MAL13P1.35(RRM)/Plasmodium_falciparum-RNCMPT00234-PBM/HughesRNA

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-ATACACAG
ATTACAC--
 A C G T C G T A A C G T C G T A A G T C C G T A A G T C C T G A A C T G
C T G A C G A T A C G T C T G A A G T C C G T A A G T C A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---ATACACAG-
SSAATCCACANN
 A C G T A C G T A C G T C G T A A C G T C G T A A G T C C G T A A G T C C T G A A C T G A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:ATACACAG-
---CACAGN
 C G T A A C G T C G T A A G T C C G T A A G T C C T G A A C T G A C G T
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Tb_0251(RRM)/Trypanosoma_brucei-RNCMPT00251-PBM/HughesRNA

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATACACAG
ATTCACA-
 C G T A A C G T C G T A A G T C C G T A A G T C C T G A A C T G
G C T A C G A T A C G T A G T C C G T A A G T C C T G A A C G T

HNRNPL(RRM)/Homo_sapiens-RNCMPT00027-PBM/HughesRNA

Match Rank:7
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATACACAG
ACACACA-
 C G T A A C G T C G T A A G T C C G T A A G T C C T G A A C T G
G T C A G T A C C G T A G A T C C G T A G T A C G T C A A C G T

BRUNOL5(RRM)/Homo_sapiens-RNCMPT00166-PBM/HughesRNA

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATACACAG
ACACACA-
 C G T A A C G T C G T A A G T C C G T A A G T C C T G A A C T G
G T C A G T A C G T C A G T A C C G T A G T A C C G T A A C G T

PAPI(KH)/Drosophila_melanogaster-RNCMPT00011-PBM/HughesRNA

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ATACACAG
ACACACA-
 C G T A A C G T C G T A A G T C C G T A A G T C C T G A A C T G
G T C A G T A C C G T A G T A C C G T A G T A C G T C A A C G T

MET28/MA0332.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:ATACACAG
--CCACAG
 C G T A A C G T C G T A A G T C C G T A A G T C C T G A A C T G
A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G