Information for 24-TATCTACTATGT (Motif 42)

A C G T C G T A A C G T A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C C G T A A C G T C G T A A C T G A C G T C G T A A C T G C G T A A C G T C G T A
p-value:1e-19
log p-value:-4.603e+01
Information Content per bp:1.530
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets96.4 +/- 58.9bp
Average Position of motif in Background104.0 +/- 45.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tb_0252(RRM)/Trypanosoma_brucei-RNCMPT00252-PBM/HughesRNA

Match Rank:1
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TATCTACTATGT
-ATCTACT----
 A C G T C G T A A C G T A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T
A C G T C G T A G A C T A G T C A C G T C G T A A G T C C G A T A C G T A C G T A C G T A C G T

Tb_0216(RRM)/Trypanosoma_brucei-RNCMPT00216-PBM/HughesRNA

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:TATCTACTATGT
----NACAATG-
 A C G T C G T A A C G T A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T G C A T C G T A A G T C C G T A C G T A A C G T A C T G A C G T

dsx-F/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TATCTACTATGT-----
---CTACAAAGTCATAA
 A C G T C G T A A C G T A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C G T A C G T C T G A A G C T G A C T C G T A

dsx-M/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TATCTACTATGT-----
---CTACAAAGTCATAA
 A C G T C G T A A C G T A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T C T G A A G T C C G T A C G T A C G T A A C T G A C G T A C G T C T G A A G C T G A C T C G T A

MSI(RRM)/Drosophila_melanogaster-RNCMPT00099-PBM/HughesRNA

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TATCTACTATGT
-ACCTACT----
 A C G T C G T A A C G T A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T
A C G T G C T A G T A C A G T C A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T

An_0287(RRM)/Aspergillus_nidulans-RNCMPT00287-PBM/HughesRNA

Match Rank:6
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TATCTACTATGT
----TACTACG-
 A C G T C G T A A C G T A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A G T A C A C T G A C G T

br(var.2)/MA0011.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TATCTACTATGT
----TACTATTT
 A C G T C G T A A C G T A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C G A T G C T A A G T C A G C T C G T A A C G T C G A T A G C T

MSI(RRM)/Drosophila_melanogaster-RNCMPT00040-PBM/HughesRNA

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TATCTACTATGT
-AACTACT----
 A C G T C G T A A C G T A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T
A C G T G C T A G T C A A G T C A C G T C G T A A G T C C G A T A C G T A C G T A C G T A C G T

HNRNPAB(RRM)/Tetraodon_nigroviridis-RNCMPT00245-PBM/HughesRNA

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TATCTACTATGT
CTATCTA------
 A C G T A C G T C G T A A C G T A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T
A G T C C G A T C G T A G C A T G T A C A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T

At3g60580(C2H2)/col-At3g60580-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TATCTACTATGT
WTTYTACT----
 A C G T C G T A A C G T A G T C A C G T C G T A A G T C A C G T C G T A A C G T A C T G A C G T
G C A T A C G T A G C T A G C T A G C T C G T A A G T C A C G T A C G T A C G T A C G T A C G T