Information for 15-GAATAAGC (Motif 43)

C T A G C G T A C G T A A C G T C G T A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T C G T A A C G T A C G T A G T C
p-value:1e-19
log p-value:-4.603e+01
Information Content per bp:1.966
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets93.7 +/- 52.2bp
Average Position of motif in Background47.1 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GAATAAGC
ARGAATAWWN
 A C G T A C G T C T A G C G T A C G T A A C G T C G T A C G T A A C T G A G T C
G C T A T C G A A C T G G T C A C G T A A C G T C G T A C G A T G C A T G A T C

Tv_0226(RRM)/Trichomonas_vaginalis-RNCMPT00226-PBM/HughesRNA

Match Rank:2
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GAATAAGC
NCAATAAN-
 A C G T C T A G C G T A C G T A A C G T C G T A C G T A A C T G A G T C
T G C A A G T C C G T A C G T A A C G T C G T A C G T A C A T G A C G T

KAN2(G2like)/colamp-KAN2-DAP-Seq(GSE60143)/Homer

Match Rank:3
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GAATAAGC
RAGAATAT--
 A C G T A C G T C T A G C G T A C G T A A C G T C G T A C G T A A C T G A G T C
C T G A T C G A A C T G G T C A C G T A A C G T C T G A G C A T A C G T A C G T

TRA2(RRM)/Drosophila_melanogaster-RNCMPT00078-PBM/HughesRNA

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GAATAAGC
GAAGAAG-
 C T A G C G T A C G T A A C G T C G T A C G T A A C T G A G T C
T C A G C G T A C T G A A T C G C G T A C G T A A T C G A C G T

KAN1/MA1027.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GAATAAGC
GAATATNT
 C T A G C G T A C G T A A C G T C G T A C G T A A C T G A G T C
C A T G T G C A C T G A G A C T C T G A G C A T G A T C G A C T

ECM22(MacIsaac)/Yeast

Match Rank:6
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GAATAAGC
CTCGTATAAGC
 A C G T A C G T A C G T C T A G C G T A C G T A A C G T C G T A C G T A A C T G A G T C
A G T C A C G T A G T C A C T G A C G T C G T A A C G T C G T A C G T A A C T G A G T C

ap/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GAATAAGC
TAATAA--
 C T A G C G T A C G T A A C G T C G T A C G T A A C T G A G T C
A G C T C G T A C G T A A C G T G C A T C T G A A C G T A C G T

Antp/dmmpmm(Bigfoot)/fly

Match Rank:8
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAATAAGC
-AATAAT-
 C T A G C G T A C G T A A C G T C G T A C G T A A C T G A G T C
A C G T T G C A C G T A A C G T C T G A C G T A C G A T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAATAAGC
ATGMATATDC
 A C G T A C G T C T A G C G T A C G T A A C G T C G T A C G T A A C T G A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

GZF3/Literature(Harbison)/Yeast

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAATAAGC
-GATAAG-
 C T A G C G T A C G T A A C G T C G T A C G T A A C T G A G T C
A C G T A C T G C G T A A C G T C G T A C G T A A C T G A C G T