Information for 17-CACCACAT (Motif 44)

A G T C C G T A A G T C A T G C C G T A A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C G T A T C G A C T G A C G T A C T G
p-value:1e-19
log p-value:-4.398e+01
Information Content per bp:1.984
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets98.2 +/- 54.7bp
Average Position of motif in Background60.6 +/- 34.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BRUNOL6(RRM)/Homo_sapiens-RNCMPT00187-PBM/HughesRNA

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:CACCACAT
CACCACA-
 A G T C C G T A A G T C A T G C C G T A A G T C C G T A A C G T
G T A C G T C A G T A C G T A C C G T A A G T C C G T A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.82
Offset:-2
Orientation:forward strand
Alignment:--CACCACAT--
NWAACCACADNN
 A C G T A C G T A G T C C G T A A G T C A T G C C G T A A G T C C G T A A C G T A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

BRU-3(RRM)/Drosophila_melanogaster-RNCMPT00122-PBM/HughesRNA

Match Rank:3
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CACCACAT
ACACCAC--
 A C G T A G T C C G T A A G T C A T G C C G T A A G T C C G T A A C G T
G T C A A G T C G T C A G T A C G T A C G T C A G T A C A C G T A C G T

Run/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:CACCACAT
CACCGCC-
 A G T C C G T A A G T C A T G C C G T A A G T C C G T A A C G T
T G A C C G T A A G T C A G T C T C A G A G T C T G A C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CACCACAT-
AAACCACAGC
 A C G T A G T C C G T A A G T C A T G C C G T A A G T C C G T A A C G T A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

UNC-75(RRM)/Caenorhabditis_elegans-RNCMPT00081-PBM/HughesRNA

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:CACCACAT
CACAACA-
 A G T C C G T A A G T C A T G C C G T A A G T C C G T A A C G T
G A T C G T C A G T A C G C T A C G T A G A T C G T C A A C G T

MET32/MA0334.1/Jaspar

Match Rank:7
Score:0.74
Offset:0
Orientation:forward strand
Alignment:CACCACAT
CGCCACA-
 A G T C C G T A A G T C A T G C C G T A A G T C C G T A A C G T
G T A C C T A G A G T C A G T C G C T A A G T C T G C A A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CACCACAT
NAAACCACAG
 A C G T A C G T A G T C C G T A A G T C A T G C C G T A A G T C C G T A A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

SFPQ(RRM)/Homo_sapiens-RNCMPT00177-PBM/HughesRNA

Match Rank:9
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CACCACAT
ACACTAC--
 A C G T A G T C C G T A A G T C A T G C C G T A A G T C C G T A A C G T
G T C A G T A C G C T A G A T C G A C T G T C A G T A C A C G T A C G T

twi/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.73
Offset:3
Orientation:forward strand
Alignment:CACCACAT--
---CACATGT
 A G T C C G T A A G T C A T G C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T C T A G A G C T