Information for 25-AAGGATAGTC (Motif 46)

C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C T G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A C G T C G T A A C G T A G T C A G T C A C G T A C G T
p-value:1e-15
log p-value:-3.605e+01
Information Content per bp:1.530
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets111.6 +/- 57.8bp
Average Position of motif in Background151.7 +/- 45.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ttk/dmmpmm(Noyes)/fly

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AAGGATAGTC---
CAAGGATAATCNAA
 A C G T C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T
T G A C T G C A C G T A A C T G A C T G C G T A A G C T C G T A C G T A A G C T T A G C T G C A C T G A G C T A

ttk/MA0460.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AAGGATAGTC
AAGGATAAT-
 C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C T G A C G T A G T C
T G C A C G T A A C T G A C T G C G T A A G C T C G T A C G T A A G C T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAGGATAGTC-
AAGGATATNTN
 C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C T G A C G T A G T C A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

G3BP2(RRM)/Homo_sapiens-RNCMPT00021-PBM/HughesRNA

Match Rank:4
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AAGGATAGTC
-AGGATGA--
 C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C T G A C G T A G T C
A C G T C G T A A C T G A C T G C G T A A C G T C T A G C T G A A C G T A C G T

SRSF1(RRM)/Homo_sapiens-RNCMPT00110-PBM/HughesRNA

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AAGGATAGTC
CAGGACAN--
 C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C T G A C G T A G T C
G T A C C G T A A C T G A C T G C G T A A T G C G T C A T G C A A C G T A C G T

TaMYB80(MYB)/Triticum aestivum/AthaMap

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAGGATAGTC--
-NGGATATTCCC
 C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T
A C G T T A C G A C T G A T C G C G T A A C G T C G T A A C G T C G A T A G T C A T G C A T G C

HNRNPAB(RRM)/Tetraodon_nigroviridis-RNCMPT00245-PBM/HughesRNA

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGGATAGTC
-TAGATAG--
 C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C T G A C G T A G T C
A C G T C G A T C T G A A C T G C G T A C G A T C G T A C T A G A C G T A C G T

At2g03500(G2like)/col-At2g03500-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAGGATAGTC---
-AGAATATTCTWW
 C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T
A C G T C T G A A C T G C G T A C G T A A C G T G T C A A C G T G C A T A G T C G A C T G C A T G C A T

At5g29000(G2like)/col-At5g29000-DAP-Seq(GSE60143)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAGGATAGTC-
DDRGAATATTCY
 A C G T C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C T G A C G T A G T C A C G T
C G A T C G T A T C G A C T A G G C T A C G T A A C G T G T C A A C G T C G A T G A T C A G C T

AT2G20400(G2like)/colamp-AT2G20400-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAGGATAGTC----
DNVGAATATTCBNHN
 A C G T C G T A C G T A A C T G A C T G C G T A A C G T C G T A A C T G A C G T A G T C A C G T A C G T A C G T A C G T
C G T A C G T A T C G A A C T G C G T A C G T A A C G T C G T A A C G T C G A T A G T C A G C T G C A T G C A T C G A T