Information for 20-GTTGTCTG (Motif 47)

A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G C G T A A G T C C G T A C G T A A G T C
p-value:1e-15
log p-value:-3.605e+01
Information Content per bp:1.530
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets111.0 +/- 51.7bp
Average Position of motif in Background71.9 +/- 40.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GTTGTCTG-
-TWGTCTGV
 A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

ARF2(ARF)/col-ARF2-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GTTGTCTG---
-TTGTCGGMWN
 A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T
A C G T G C A T A C G T A C T G A C G T A G T C A C T G A T C G G T C A C G A T C G T A

sma-4/MA0925.1/Jaspar

Match Rank:3
Score:0.79
Offset:0
Orientation:forward strand
Alignment:GTTGTCTG---
AGTGTCTGGAC
 A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T
C G T A T C A G A C G T A C T G C G A T A G T C A C G T C T A G A C T G T C G A A G T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-GTTGTCTG-
VBSYGTCTGG
 A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.77
Offset:1
Orientation:forward strand
Alignment:GTTGTCTG-
-CTGTCTGG
 A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GTTGTCTG------
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

RBP1(RRM)/Drosophila_melanogaster-RNCMPT00058-PBM/HughesRNA

Match Rank:7
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GTTGTCTG
TCGTTGT---
 A C G T A C G T A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G
A G C T A G T C A C T G A C G T A C G T A C T G C G A T A C G T A C G T A C G T

ARF5/MA0943.1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTTGTCTG-
-TTGTCGGC
 A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T
A C G T G A C T A C G T T A C G A G C T G A T C A C T G A T C G A G T C

ARF8/MA0944.1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTTGTCTG-
TTTGTCGGC
 A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T
G C A T G A C T C A G T C A T G A G C T G A T C C A T G T A C G G T A C

HNRPLL(RRM)/Homo_sapiens-RNCMPT00178-PBM/HughesRNA

Match Rank:10
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GTTGTCTG-
--TGTGTGT
 A C T G A C G T A C G T A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C T G A G C T C T A G A C G T A C T G A G C T