Information for 25-TTGGAGTT (Motif 49)

A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T A G T C A G T C C G T A C G T A
p-value:1e-11
log p-value:-2.684e+01
Information Content per bp:1.530
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets113.9 +/- 49.3bp
Average Position of motif in Background70.7 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pp_0237(RRM)/Physcomitrella_patens-RNCMPT00237-PBM/HughesRNA

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TTGGAGTT
GATGGAGT-
 A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T
A C T G C G T A A C G T A C T G A C T G C G T A C T A G A C G T A C G T

SUT2/MA0400.1/Jaspar

Match Rank:2
Score:0.77
Offset:-6
Orientation:reverse strand
Alignment:------TTGGAGTT------
NNNNNTTCGGAGTTTNNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A G C T A C G A T C A G T G A C T G A C T G A T C A T C G C A T G C T G A T A C G G C A T G C A T G A C T C G T A C G A T G A T C G T C A C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TTGGAGTT-----
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

YLR278C/MA0430.1/Jaspar

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:TTGGAGTT
CCGGAGTT
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T
A G T C A G T C A C T G A C T G C T G A T A C G C G A T C G A T

ADR1/Literature(Harbison)/Yeast

Match Rank:5
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTGGAGTT
-NGGAGG-
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C T G A C T G C T A G A C T G A C G T A C G T

ADR1(MacIsaac)/Yeast

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTGGAGTT
-NGGAGG-
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C T G A C T G C T A G A C T G A C G T A C G T

HAP2/MA0313.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTGGAGTT
TTGGT---
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T
A C G T A C G T C T A G A C T G G A C T A C G T A C G T A C G T

brk/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTGGAGTT
-TGGCGCT
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C T G A C T G A G T C A C T G A G T C A G C T

Bgb::run/MA0242.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTGGAGTT-
TTGCGGTTA
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C G T
A G C T C G A T A C T G A G T C A T C G A C T G A G C T G A C T C G T A

Rbm42(RRM)/Xenopus_tropicalis-RNCMPT00282-PBM/HughesRNA

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTGGAGTT-
-NGTAGTTG
 A C G T A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C G T
A C G T G A T C A C T G A C G T C G T A A C T G A C G T C G A T A T C G