Information for 6-YTGATTGATTGA (Motif 6)

G A C T A C G T A T C G C T G A C G A T C G A T A C T G G C T A A G C T C A G T A C T G G T C A
Reverse Opposite:
A C G T A G T C G C T A C T G A C G A T G T A C C G T A C G T A A G C T A T G C C G T A C T G A
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.793
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets545.2 +/- 450.7bp
Average Position of motif in Background2486.1 +/- 1523.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

WUS1(Homeobox)/colamp-WUS1-DAP-Seq(GSE60143)/Homer

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:YTGATTGATTGA
-TGAATGAWTG-
 G A C T A C G T A T C G C T G A C G A T C G A T A C T G G C T A A G C T C A G T A C T G G T C A
A C G T C G A T T C A G G C T A G C T A C G A T C T A G G T C A G C T A C G A T C A T G A C G T

PBX1/MA0070.1/Jaspar

Match Rank:2
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-YTGATTGATTGA
TTTGATTGATGN-
 A C G T G A C T A C G T A T C G C T G A C G A T C G A T A C T G G C T A A G C T C A G T A C T G G T C A
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:YTGATTGATTGA
-TGATTTATGGC
 G A C T A C G T A T C G C T G A C G A T C G A T A C T G G C T A A G C T C A G T A C T G G T C A
A C G T C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:4
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:YTGATTGATTGA
-TGATTGATGA-
 G A C T A C G T A T C G C T G A C G A T C G A T A C T G G C T A A G C T C A G T A C T G G T C A
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:5
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:YTGATTGATTGA-
-TGATTTATGGCC
 G A C T A C G T A T C G C T G A C G A T C G A T A C T G G C T A A G C T C A G T A C T G G T C A A C G T
A C G T C G A T C T A G C G T A C G A T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

Hoxc9/MA0485.1/Jaspar

Match Rank:6
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:YTGATTGATTGA-
NTGATTTATGGCC
 G A C T A C G T A T C G C T G A C G A T C G A T A C T G G C T A A G C T C A G T A C T G G T C A A C G T
T C A G C G A T C T A G C G T A A C G T C G A T A C G T C T G A G A C T C A T G C T A G A T G C G A T C

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:7
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:YTGATTGATTGA-
-TGATTTATGGCC
 G A C T A C G T A T C G C T G A C G A T C G A T A C T G G C T A A G C T C A G T A C T G G T C A A C G T
A C G T C G A T C T A G G C T A C G A T C A G T A C G T G T C A A G C T C A T G T C A G A G T C A G T C

LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer

Match Rank:8
Score:0.74
Offset:0
Orientation:forward strand
Alignment:YTGATTGATTGA
ATGATTRATG--
 G A C T A C G T A T C G C T G A C G A T C G A T A C T G G C T A A G C T C A G T A C T G G T C A
C G T A C G A T C T A G G T C A G A C T C G A T C T A G C G T A A C G T C A T G A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:YTGATTGATTGA
TTGATTGN----
 G A C T A C G T A T C G C T G A C G A T C G A T A C T G G C T A A G C T C A G T A C T G G T C A
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T A C G T

onecut/MA0235.1/Jaspar

Match Rank:10
Score:0.72
Offset:0
Orientation:forward strand
Alignment:YTGATTGATTGA
TTGATTT-----
 G A C T A C G T A T C G C T G A C G A T C G A T A C T G G C T A A G C T C A G T A C T G G T C A
G A C T A C G T A C T G C G T A A C G T A C G T C G A T A C G T A C G T A C G T A C G T A C G T