Information for 13-AAAAATAGCCAC (Motif 12)

C G T A T G C A G T C A G T C A G T C A C A G T C G T A T A C G A G T C G A T C G T C A G T A C
Reverse Opposite:
C A T G C A G T C T A G T C A G A T G C G C A T G T C A C A G T A C G T C A G T A C G T G C A T
p-value:1e-4
log p-value:-1.092e+01
Information Content per bp:1.534
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif71.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets373.5 +/- 287.7bp
Average Position of motif in Background1602.4 +/- 2506.4bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---AAAAATAGCCAC
DCYAAAAATAGM---
 A C G T A C G T A C G T C G T A T G C A G T C A G T C A G T C A C A G T C G T A T A C G A G T C G A T C G T C A G T A C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:2
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AAAAATAGCCAC
ATGCTAAAAATAGAA--
 A C G T A C G T A C G T A C G T A C G T C G T A T G C A G T C A G T C A G T C A C A G T C G T A T A C G A G T C G A T C G T C A G T A C
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---AAAAATAGCCAC
GCTAAAAATAGC---
 A C G T A C G T A C G T C G T A T G C A G T C A G T C A G T C A C A G T C G T A T A C G A G T C G A T C G T C A G T A C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

pan/dmmpmm(Down)/fly

Match Rank:4
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAAAATAGCCAC
AAAAACA-----
 C G T A T G C A G T C A G T C A G T C A C A G T C G T A T A C G A G T C G A T C G T C A G T A C
G T C A G T C A T G C A G T C A G T C A A G T C G C T A A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---AAAAATAGCCAC
KCCAAAAATAGC---
 A C G T A C G T A C G T C G T A T G C A G T C A G T C A G T C A C A G T C G T A T A C G A G T C G A T C G T C A G T A C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAAAATAGCCAC
CCAAAAATAG----
 A C G T A C G T C G T A T G C A G T C A G T C A G T C A C A G T C G T A T A C G A G T C G A T C G T C A G T A C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T

HNRNPC(RRM)/Homo_sapiens-RNCMPT00025-PBM/HughesRNA

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAAAATAGCCAC
AAAAAAT------
 A C G T C G T A T G C A G T C A G T C A G T C A C A G T C G T A T A C G A G T C G A T C G T C A G T A C
T G C A C G T A C G T A C G T A C G T A C G T A C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AAAAATAGCCAC
CTAAAAATAA----
 A C G T A C G T C G T A T G C A G T C A G T C A G T C A C A G T C G T A T A C G A G T C G A T C G T C A G T A C
A G T C A G C T C G T A C G T A C G T A C G T A C G T A A C G T C G T A T C G A A C G T A C G T A C G T A C G T

HNRNPCL1(RRM)/Homo_sapiens-RNCMPT00167-PBM/HughesRNA

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-AAAAATAGCCAC
AAAAAAT------
 A C G T C G T A T G C A G T C A G T C A G T C A C A G T C G T A T A C G A G T C G A T C G T C A G T A C
T G C A C G T A C G T A C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Tb_0253(RRM)/Trypanosoma_brucei-RNCMPT00253-PBM/HughesRNA

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AAAAATAGCCAC
AGAAAAA-----
 C G T A T G C A G T C A G T C A G T C A C A G T C G T A T A C G A G T C G A T C G T C A G T A C
C G T A C T A G C G T A C T G A C G T A T C G A C T G A A C G T A C G T A C G T A C G T A C G T