Information for 15-TTTTTAAAGGTA (Motif 14)

A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A
Reverse Opposite:
A C G T C G T A A G T C A G T C A C G T A C G T A C G T C G T A C G T A C G T A C G T A C G T A
p-value:1e-4
log p-value:-1.008e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets194.3 +/- 149.8bp
Average Position of motif in Background2445.1 +/- 3108.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RME1/MA0370.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TTTTTAAAGGTA
--TCCAAAGGAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A G C T A G T C A G T C C G T A C T G A G T C A C T A G C T A G T G C A C T G A

RME1(MacIsaac)/Yeast

Match Rank:2
Score:0.70
Offset:2
Orientation:forward strand
Alignment:TTTTTAAAGGTA
--TCCAAAGGAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A G C T A G T C A G T C C T G A C T G A G T C A C T A G C T A G T G C A C T G A

gt/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TTTTTAAAGGTA
TTTTTA------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A
C G A T A C G T C G A T A C G T A C G T G T C A A C G T A C G T A C G T A C G T A C G T A C G T

At2g41835(C2H2)/col-At2g41835-DAP-Seq(GSE60143)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TTTTTAAAGGTA
TTTTCAAA----
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A
A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A C G T A C G T A C G T A C G T

hb/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TTTTTAAAGGTA
TTTTTTAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A
G C A T A C G T A G C T A G C T A C G T G A C T C T G A G C A T A C G T A C G T A C G T A C G T A C G T

hb/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TTTTTAAAGGTA
TTTTTT------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A
A G C T A C G T A G C T C G A T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

TBP(- other)/several species/AthaMap

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTTTAAAGGTA
GGTATTTATAGN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A
A C T G T A C G G A C T C G T A G A C T C G A T A C G T C T G A C G A T C G T A C A T G C G A T A C G T A C G T

HOXA13/MA0650.1/Jaspar

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTTAAAGGTA
TTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTTTAAAGGTA
NTTTTATTGG--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

RLM1(MacIsaac)/Yeast

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTTTTAAAGGTA
TATTTATAGA--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A C G T C G T A
A G C T C G T A C G A T C A G T C A G T C G T A C G A T C T G A A T C G C T G A A C G T A C G T