Information for 2-KCYVGGGAGCGC (Motif 2)

C A G T A T G C G A C T T G C A A T C G A T C G C T A G C G T A A T C G G A T C A C T G A G T C
Reverse Opposite:
A C T G T A G C C T A G T A G C C G A T A G T C A T G C A T G C A C G T C T G A A T C G G T C A
p-value:1e-8
log p-value:-1.875e+01
Information Content per bp:1.589
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif0.26%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets272.8 +/- 147.6bp
Average Position of motif in Background1778.2 +/- 1303.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ARALYDRAFT_496250/MA1096.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:KCYVGGGAGCGC
----GGGACCAC
 C A G T A T G C G A C T T G C A A T C G A T C G C T A G C G T A A T C G G A T C A C T G A G T C
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A G T C

TCP17(TCP)/col-TCP17-DAP-Seq(GSE60143)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:KCYVGGGAGCGC
--TGGGGACCAC
 C A G T A T G C G A C T T G C A A T C G A T C G C T A G C G T A A T C G G A T C A C T G A G T C
A C G T A C G T A G C T C A T G A C T G A C T G A C T G G T C A A G T C A G T C C T G A A G T C

ARALYDRAFT_897773/MA1054.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:KCYVGGGAGCGC
--TGGGGACCAC
 C A G T A T G C G A C T T G C A A T C G A T C G C T A G C G T A A T C G G A T C A C T G A G T C
A C G T A C G T A G C T A C T G C A T G C A T G T A C G G T C A A T G C A T G C C T G A G A T C

TCP4/MA1035.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:KCYVGGGAGCGC
----GGGACCAC
 C A G T A T G C G A C T T G C A A T C G A T C G C T A G C G T A A T C G G A T C A C T G A G T C
A C G T A C G T A C G T A C G T C A T G A C T G A C T G G T C A A G T C A G T C C G T A A G T C

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--KCYVGGGAGCGC-
GTTCTCGCGAGANCC
 A C G T A C G T C A G T A T G C G A C T T G C A A T C G A T C G C T A G C G T A A T C G G A T C A C T G A G T C A C G T
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

PCF5(TCP)/Oryza sativa/AthaMap

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:KCYVGGGAGCGC
--NNGGGACCAC
 C A G T A T G C G A C T T G C A A T C G A T C G C T A G C G T A A T C G G A T C A C T G A G T C
A C G T A C G T C T A G A T G C A C T G A C T G A C T G T C G A A G T C G T A C T C G A A G T C

PTF1(TCP)/colamp-PTF1-DAP-Seq(GSE60143)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:KCYVGGGAGCGC-
-RDDGGGACCACA
 C A G T A T G C G A C T T G C A A T C G A T C G C T A G C G T A A T C G G A T C A C T G A G T C A C G T
A C G T C T G A C G A T C A G T C A T G A C T G A T C G G T C A A G T C A G T C G T C A A G T C G C T A

TCP5/MA1067.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:KCYVGGGAGCGC
----GGGACCAC
 C A G T A T G C G A C T T G C A A T C G A T C G C T A G C G T A A T C G G A T C A C T G A G T C
A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A A G T C A G T C C G T A A G T C

ZBTB33/MA0527.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-KCYVGGGAGCGC--
CTCTCGCGAGATCTG
 A C G T C A G T A T G C G A C T T G C A A T C G A T C G C T A G C G T A A T C G G A T C A C T G A G T C A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

TCP16/MA0587.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:KCYVGGGAGCGC
--CCGGGTCCAC
 C A G T A T G C G A C T T G C A A T C G A T C G C T A G C G T A A T C G G A T C A C T G A G T C
A C G T A C G T A T G C A G T C A C T G A C T G A T C G G A C T A G T C A G T C C T G A G A T C