Information for 23-ATTCTTGGCATT (Motif 22)

G C T A A C G T A G C T G A T C G A C T C G A T C A T G C A T G A G T C G T C A C A G T A G C T
Reverse Opposite:
T C G A G T C A C A G T T C A G G T A C G T A C G C T A C T G A C T A G T C G A T G C A C G A T
p-value:1e0
log p-value:-1.081e+00
Information Content per bp:1.690
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif0.20%
Number of Background Sequences with motif37.0
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets330.1 +/- 221.3bp
Average Position of motif in Background1256.9 +/- 1401.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RIM101/Literature(Harbison)/Yeast

Match Rank:1
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:ATTCTTGGCATT
---CTTGGCA--
 G C T A A C G T A G C T G A T C G A C T C G A T C A T G C A T G A G T C G T C A C A G T A G C T
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T

RIM101(MacIsaac)/Yeast

Match Rank:2
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:ATTCTTGGCATT
---CTTGGCA--
 G C T A A C G T A G C T G A T C G A C T C G A T C A T G C A T G A G T C G T C A C A G T A G C T
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C C G T A A C G T A C G T

RIM101/MA0368.1/Jaspar

Match Rank:3
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:ATTCTTGGCATT
---CTTGGCG--
 G C T A A C G T A G C T G A T C G A C T C G A T C A T G C A T G A G T C G T C A C A G T A G C T
A C G T A C G T A C G T A G T C A C G T A C G T A C T G A C T G A G T C C T A G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:ATTCTTGGCATT
--NNTTGGCANN
 G C T A A C G T A G C T G A T C G A C T C G A T C A T G C A T G A G T C G T C A C A G T A G C T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:5
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATTCTTGGCATT
-TTCTTGGAAAN
 G C T A A C G T A G C T G A T C G A C T C G A T C A T G C A T G A G T C G T C A C A G T A G C T
A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:ATTCTTGGCATT
---NTTGGCANN
 G C T A A C G T A G C T G A T C G A C T C G A T C A T G C A T G A G T C G T C A C A G T A G C T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Stat92E/MA0532.1/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ATTCTTGGCATT---
TTTCCNGGAANTNCG
 G C T A A C G T A G C T G A T C G A C T C G A T C A T G C A T G A G T C G T C A C A G T A G C T A C G T A C G T A C G T
G C A T A C G T G C A T A T G C G A T C G A C T T C A G C T A G C T G A T C G A G C A T G A C T A T G C A G T C T C A G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.66
Offset:4
Orientation:forward strand
Alignment:ATTCTTGGCATT
----TTGGCA--
 G C T A A C G T A G C T G A T C G A C T C G A T C A T G C A T G A G T C G T C A C A G T A G C T
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:ATTCTTGGCATT
---CTTGGCAA-
 G C T A A C G T A G C T G A T C G A C T C G A T C A T G C A T G A G T C G T C A C A G T A G C T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T

Hic1/MA0739.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ATTCTTGGCATT
--GGTTGGCAT-
 G C T A A C G T A G C T G A T C G A C T C G A T C A T G C A T G A G T C G T C A C A G T A G C T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T