Information for 4-CCGGGAAAAA (Motif 24)

T G A C G T A C C A T G T A C G C T A G T C G A C T G A G C T A G T C A T C G A
Reverse Opposite:
A G C T C A G T C G A T G A C T A G C T G A T C A T G C G T A C C A T G A C T G
p-value:1e0
log p-value:-7.925e-01
Information Content per bp:1.471
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.09%
Number of Background Sequences with motif17.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets198.5 +/- 102.8bp
Average Position of motif in Background975.8 +/- 1025.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CCGGGAAAAA
--TGGAAAA-
 T G A C G T A C C A T G T A C G C T A G T C G A C T G A G C T A G T C A T C G A
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

U2AF2(RRM)/Homo_sapiens-RNCMPT00079-PBM/HughesRNA

Match Rank:2
Score:0.76
Offset:3
Orientation:reverse strand
Alignment:CCGGGAAAAA
---GAAAAAA
 T G A C G T A C C A T G T A C G C T A G T C G A C T G A G C T A G T C A T C G A
A C G T A C G T A C G T C T A G C T G A C T G A C G T A C G T A C G T A C G T A

PCBP3(KH)/Mus_musculus-RNCMPT00215-PBM/HughesRNA

Match Rank:3
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:CCGGGAAAAA
-AGGGAAAG-
 T G A C G T A C C A T G T A C G C T A G T C G A C T G A G C T A G T C A T C G A
A C G T C G T A A C T G A C T G C T A G C G T A C G T A C T G A C A T G A C G T

Pcbp2(KH)/Danio_rerio-RNCMPT00246-PBM/HughesRNA

Match Rank:4
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CCGGGAAAAA
--GGGAAAN-
 T G A C G T A C C A T G T A C G C T A G T C G A C T G A G C T A G T C A T C G A
A C G T A C G T A C T G A C T G A C T G C G T A C G T A C G T A A C T G A C G T

Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer

Match Rank:5
Score:0.74
Offset:2
Orientation:forward strand
Alignment:CCGGGAAAAA----
--GGGAAAAMCCCG
 T G A C G T A C C A T G T A C G C T A G T C G A C T G A G C T A G T C A T C G A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T C A G T C A G C T G A G C T A G C T A G C T A G T A C G T A C T A G C T G A C T C A G

dl/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CCGGGAAAAA--
--GGGAAAATCC
 T G A C G T A C C A T G T A C G C T A G T C G A C T G A G C T A G T C A T C G A A C G T A C G T
A C G T A C G T A T C G T C A G C T A G T C G A G C T A C G T A C G T A G A C T G T A C T G A C

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CCGGGAAAAA
CTTCTGGGAAA--
 A C G T A C G T A C G T T G A C G T A C C A T G T A C G C T A G T C G A C T G A G C T A G T C A T C G A
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T A C G T

RGT1(MacIsaac)/Yeast

Match Rank:8
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCGGGAAAAA
GCCGGAAAAA
 T G A C G T A C C A T G T A C G C T A G T C G A C T G A G C T A G T C A T C G A
A T C G A G T C A G T C A C T G A C T G C G T A C G T A C G T A C G T A C G T A

EDS1/MA0294.1/Jaspar

Match Rank:9
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CCGGGAAAAA-
--CGGAAAAAT
 T G A C G T A C C A T G T A C G C T A G T C G A C T G A G C T A G T C A T C G A A C G T
A C G T A C G T A G T C A C T G A C T G C G T A C G T A G T C A C G T A C G T A G A C T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CCGGGAAAAA
AATGGAAAAT
 T G A C G T A C C A T G T A C G C T A G T C G A C T G A G C T A G T C A T C G A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T