Information for 6-AAGGATTCGT (Motif 25)

G T C A C T G A C A T G A T C G T C G A G C A T C G A T G A T C A C T G A G C T
Reverse Opposite:
T C G A T G A C C T A G G C T A C G T A A G C T T A G C G T A C G A C T C A G T
p-value:1e0
log p-value:-6.236e-01
Information Content per bp:1.673
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif0.29%
Number of Background Sequences with motif64.9
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets444.4 +/- 498.9bp
Average Position of motif in Background1404.4 +/- 1784.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Kr/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AAGGATTCGT
AAAGGGTTA--
 A C G T G T C A C T G A C A T G A T C G T C G A G C A T C G A T G A T C A C T G A G C T
C T G A G C T A G T C A T A C G C A T G C T A G C A G T C A G T C T G A A C G T A C G T

PH0138.1_Pitx2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAGGATTCGT----
TGAAGGGATTAATCATC
 A C G T A C G T A C G T G T C A C T G A C A T G A T C G T C G A G C A T C G A T G A T C A C T G A G C T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

ZmHOX2a(1)(HD-HOX)/Zea mays/AthaMap

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAGGATTCGT
TTAGGAC----
 A C G T G T C A C T G A C A T G A T C G T C G A G C A T C G A T G A T C A C T G A G C T
C G A T A G C T C G T A A C T G A C T G C G T A G A T C A C G T A C G T A C G T A C G T

HAT1/MA1024.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AAGGATTCGT
NAATGATTGN-
 A C G T G T C A C T G A C A T G A T C G T C G A G C A T C G A T G A T C A C T G A G C T
A G C T G T C A C G T A A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T

G3BP2(RRM)/Homo_sapiens-RNCMPT00021-PBM/HughesRNA

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AAGGATTCGT
-AGGATGA--
 G T C A C T G A C A T G A T C G T C G A G C A T C G A T G A T C A C T G A G C T
A C G T C G T A A C T G A C T G C G T A A C G T C T A G C T G A A C G T A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGGATTCGT-
AAGGATATNTN
 G T C A C T G A C A T G A T C G T C G A G C A T C G A T G A T C A C T G A G C T A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGGATTCGT
VRGGATTARN
 G T C A C T G A C A T G A T C G T C G A G C A T C G A T G A T C A C T G A G C T
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

HAT2(Homeobox)/colamp-HAT2-DAP-Seq(GSE60143)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AAGGATTCGT
YAATSATTRG-
 A C G T G T C A C T G A C A T G A T C G T C G A G C A T C G A T G A T C A C T G A G C T
G A T C G C T A G C T A A G C T T A C G C T G A C A G T C G A T C T A G C T A G A C G T

PH0130.1_Otx2/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAGGATTCGT----
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T G T C A C T G A C A T G A T C G T C G A G C A T C G A T G A T C A C T G A G C T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

ATHB6(Homeobox)/col-ATHB6-DAP-Seq(GSE60143)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAGGATTCGT
AATGATTG--
 G T C A C T G A C A T G A T C G T C G A G C A T C G A T G A T C A C T G A G C T
G C T A C G T A A C G T A T C G C G T A A C G T A C G T C T A G A C G T A C G T