Information for 8-TAGCTCTTGB (Motif 26)

C G A T C T G A A T C G T G A C G A C T T G A C G A C T A C G T T C A G A T C G
Reverse Opposite:
T A G C A G T C G T C A C T G A A C T G C T G A A C T G T A G C A G C T G C T A
p-value:1e0
log p-value:-3.360e-01
Information Content per bp:1.680
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif167.4
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets306.3 +/- 243.0bp
Average Position of motif in Background1247.8 +/- 1773.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tb_0217(RRM)/Trypanosoma_brucei-RNCMPT00217-PBM/HughesRNA

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TAGCTCTTGB
---CTGTTGT
 C G A T C T G A A T C G T G A C G A C T T G A C G A C T A C G T T C A G A T C G
A C G T A C G T A C G T A G T C A C G T A C T G A C G T A C G T A C T G A G C T

Sf3b4(RRM)/Danio_rerio-RNCMPT00224-PBM/HughesRNA

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TAGCTCTTGB
---CTTTTGN
 C G A T C T G A A T C G T G A C G A C T T G A C G A C T A C G T T C A G A T C G
A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T C T A G G T C A

GATA11/MA1014.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TAGCTCTTGB
TAGATCTG--
 C G A T C T G A A T C G T G A C G A C T T G A C G A C T A C G T T C A G A T C G
C A G T C T G A A C T G C G T A A C G T A G T C A C G T A C T G A C G T A C G T

GATA9/MA1018.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAGCTCTTGB
NCAGATCTAGN
 A C G T C G A T C T G A A T C G T G A C G A C T T G A C G A C T A C G T T C A G A T C G
C G T A G A T C C T G A A C T G C G T A A C G T A G T C A G C T C T G A A C T G C G T A

AGP1(GATA)/Nicotiana tabacum/AthaMap

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAGCTCTTGB
NTAGATCTGA-
 A C G T C G A T C T G A A T C G T G A C G A C T T G A C G A C T A C G T T C A G A T C G
T A C G G A C T C T G A A C T G C G T A A C G T A G T C A C G T T C A G C G T A A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TAGCTCTTGB--
CCACCTGTTGCAT
 A C G T C G A T C T G A A T C G T G A C G A C T T G A C G A C T A C G T T C A G A T C G A C G T A C G T
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

MATR3(RRM)/Homo_sapiens-RNCMPT00037-PBM/HughesRNA

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TAGCTCTTGB
--AATCTTG-
 C G A T C T G A A T C G T G A C G A C T T G A C G A C T A C G T T C A G A T C G
A C G T A C G T G T C A C G T A C G A T A G T C A C G T A C G T C T A G A C G T

SRD1/MA0389.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TAGCTCTTGB
GTAGATCT---
 A C G T C G A T C T G A A T C G T G A C G A C T T G A C G A C T A C G T T C A G A T C G
A C T G A C G T C T G A A C T G G C T A C G A T A G T C A G C T A C G T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TAGCTCTTGB--
ANCCACCTGTTGCNC
 A C G T A C G T A C G T C G A T C T G A A T C G T G A C G A C T T G A C G A C T A C G T T C A G A T C G A C G T A C G T
C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

GAT3/MA0301.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TAGCTCTTGB
NNTAGATCT---
 A C G T A C G T C G A T C T G A A T C G T G A C G A C T T G A C G A C T A C G T T C A G A T C G
A C G T A C T G A C G T C T G A C A T G G C T A C G A T A G T C A G C T A C G T A C G T A C G T