Information for 9-AACAAAGAAATG (Motif 8)

C G T A C G T A A G T C C G T A C G T A C T G A C T A G C G T A G C T A C T G A C G A T A T C G
Reverse Opposite:
A T G C G C T A A G C T C G A T C G A T G A T C A G C T G A C T C G A T A C T G A C G T A C G T
p-value:1e-5
log p-value:-1.316e+01
Information Content per bp:1.852
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif121.6
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets349.9 +/- 298.5bp
Average Position of motif in Background1429.2 +/- 2395.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0071.1_Sox4_1/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:forward strand
Alignment:-----AACAAAGAAATG
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A C T G A C T A G C G T A G C T A C T G A C G A T A T C G
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:forward strand
Alignment:-----AACAAAGAAATG
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A C T G A C T A G C G T A G C T A C T G A C G A T A T C G
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--AACAAAGAAATG
GGAACAAAGR----
 A C G T A C G T C G T A C G T A A G T C C G T A C G T A C T G A C T A G C G T A G C T A C T G A C G A T A T C G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

SeqBias: polyA-repeat

Match Rank:4
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AACAAAGAAATG
AAAAAAAAAA--
 C G T A C G T A A G T C C G T A C G T A C T G A C T A G C G T A G C T A C T G A C G A T A T C G
C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T

VRN1(ABI3VP1)/col-VRN1-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AACAAAGAAATG
AAAAAAAAAA--
 C G T A C G T A A G T C C G T A C G T A C T G A C T A G C G T A G C T A C T G A C G A T A T C G
C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:6
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----AACAAAGAAATG
AAACAGACAAAGGAAT-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A A G T C C G T A C G T A C T G A C T A G C G T A G C T A C T G A C G A T A T C G
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AACAAAGAAATG
VRRACAAWGG----
 A C G T A C G T C G T A C G T A A G T C C G T A C G T A C T G A C T A G C G T A G C T A C T G A C G A T A T C G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

HuR(RRM)/Homo_sapiens-RNCMPT00112-PBM/HughesRNA

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AACAAAGAAATG
AAACAAA------
 A C G T C G T A C G T A A G T C C G T A C G T A C T G A C T A G C G T A G C T A C T G A C G A T A T C G
C G T A C G T A G T C A G A T C G C T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

HuR(RRM)/Homo_sapiens-RNCMPT00117-PBM/HughesRNA

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AACAAAGAAATG
AAACAAA------
 A C G T C G T A C G T A A G T C C G T A C G T A C T G A C T A G C G T A G C T A C T G A C G A T A T C G
G T C A C T G A G T C A A G T C G C T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--AACAAAGAAATG
AAAACAAAGG----
 A C G T A C G T C G T A C G T A A G T C C G T A C G T A C T G A C T A G C G T A G C T A C T G A C G A T A T C G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T