Information for 10-CTTTCAACAGGT (Motif 9)

A G T C A C G T A C G T C G A T A G T C C G T A C G T A A G T C G T C A A C T G A T C G A C G T
Reverse Opposite:
C G T A A T G C A G T C A C G T A C T G A C G T A C G T A C T G C G T A C G T A C G T A A C T G
p-value:1e-5
log p-value:-1.288e+01
Information Content per bp:1.914
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif7.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets432.0 +/- 253.4bp
Average Position of motif in Background1203.6 +/- 1461.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT2/MA0744.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTTTCAACAGGT--
-ATGCAACAGGTGG
 A G T C A C G T A C G T C G A T A G T C C G T A C G T A A G T C G T C A A C T G A T C G A C G T A C G T A C G T
A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

SCRT1/MA0743.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTTTCAACAGGT----
-GAGCAACAGGTGGTT
 A G T C A C G T A C G T C G A T A G T C C G T A C G T A A G T C G T C A A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

PL0017.1_hlh-2::hlh-10/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTTTCAACAGGT------
-CCGGAACAGGTGGTCGA
 A G T C A C G T A C G T C G A T A G T C C G T A C G T A A G T C G T C A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G T C G A T C C A T G A C T G T G C A T C G A A G T C C G T A A C T G T A C G A C G T A C T G A C T G A C G T T A G C A C G T C T G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTTTCAACAGGT
SCTGTCARCACC-
 A C G T A G T C A C G T A C G T C G A T A G T C C G T A C G T A A G T C G T C A A C T G A T C G A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T

MYB73(MYB)/col-MYB73-DAP-Seq(GSE60143)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTTTCAACAGGT---
NNNNHAACNGHHDHN
 A G T C A C G T A C G T C G A T A G T C C G T A C G T A A G T C G T C A A C T G A T C G A C G T A C G T A C G T A C G T
G C T A G C A T G C T A G C A T G C A T C G T A C G T A A G T C A G T C A C T G G C A T G C A T C G T A G C T A G C T A

Tb_0217(RRM)/Trypanosoma_brucei-RNCMPT00217-PBM/HughesRNA

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTTTCAACAGGT
---ACAACAG--
 A G T C A C G T A C G T C G A T A G T C C G T A C G T A A G T C G T C A A C T G A T C G A C G T
A C G T A C G T A C G T C T G A T G A C G T C A G T C A T G A C G T C A C T A G A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTTTCAACAGGT---
---AAAACCGGTTTT
 A G T C A C G T A C G T C G A T A G T C C G T A C G T A A G T C G T C A A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTTTCAACAGGT
-TTGCAACATN-
 A G T C A C G T A C G T C G A T A G T C C G T A C G T A A G T C G T C A A C T G A T C G A C G T
A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C A C G T

sna/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CTTTCAACAGGT--
-----ANCAGGTGG
 A G T C A C G T A C G T C G A T A G T C C G T A C G T A A G T C G T C A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A C T A G A G T C C T G A C T A G A C T G A C G T C A T G T C A G

TFCP2/MA0145.3/Jaspar

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTTTCAACAGGT--
----AAACCGGTTT
 A G T C A C G T A C G T C G A T A G T C C G T A C G T A A G T C G T C A A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T