Left reads: Input : 61177436 Mapped : 52922178 (86.5% of input) of these: 3925260 ( 7.4%) have multiple alignments (28483 have >20) Right reads: Input : 61177436 Mapped : 52289299 (85.5% of input) of these: 3868059 ( 7.4%) have multiple alignments (28496 have >20) 86.0% overall read mapping rate. Aligned pairs: 50019814 of these: 3722026 ( 7.4%) have multiple alignments 449937 ( 0.9%) are discordant alignments 81.0% concordant pair alignment rate.