Left reads: Input : 43448255 Mapped : 35446223 (81.6% of input) of these: 1591652 ( 4.5%) have multiple alignments (9347 have >20) Right reads: Input : 43448255 Mapped : 34998304 (80.6% of input) of these: 1556428 ( 4.4%) have multiple alignments (9381 have >20) 81.1% overall read mapping rate. Aligned pairs: 33608844 of these: 1498335 ( 4.5%) have multiple alignments 156348 ( 0.5%) are discordant alignments 77.0% concordant pair alignment rate.