Left reads: Input : 56911023 Mapped : 46966431 (82.5% of input) of these: 2411330 ( 5.1%) have multiple alignments (10251 have >20) Right reads: Input : 56911023 Mapped : 46584232 (81.9% of input) of these: 2359614 ( 5.1%) have multiple alignments (10210 have >20) 82.2% overall read mapping rate. Aligned pairs: 44316432 of these: 2276186 ( 5.1%) have multiple alignments 266092 ( 0.6%) are discordant alignments 77.4% concordant pair alignment rate.