Sample	0	1	2	3	4	5	6	7	8	9	10	11	12	13	14	15	16	17	18	19	20	21	22	23	24	25	26	27	28	29	30	31	32	33	34	35	36	37
high_error_high_variance_R1	(1, 0.007560840721522623)	(2, 0.006514791004057043)	(3, 0.005411917808679971)	(4, 0.004317754781449915)	(5, 0.0032430859400727073)	(6, 0.002142286594254449)	(7, 0.0010701063723478176)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.520183012909958e-05)	(145, 0.0012451392751116855)	(150, 0.0021675875588719746)
high_error_high_variance_R2	(1, 0.007569136119757877)	(2, 0.006463774304910228)	(3, 0.005375832826356614)	(4, 0.004277936869920694)	(5, 0.003207415727661114)	(6, 0.0021543149216955676)	(7, 0.0010713506820831057)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.586546198791993e-05)	(145, 0.001236843876876431)	(150, 0.002158047850901432)
high_variance_R1	(1, 0.007615590349875302)	(2, 0.0065181091633511445)	(3, 0.005401963330797665)	(4, 0.00435052160447917)	(5, 0.00326631305513142)	(6, 0.0021576330809896693)	(7, 0.0010779870006713092)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.271321065852327e-05)	(145, 0.0012657118627351163)	(150, 0.0022123827093423485)
high_variance_R2	(1, 0.0076342549959046236)	(2, 0.006547972596998061)	(3, 0.005481599153856107)	(4, 0.004394072445214256)	(5, 0.0032974207985136243)	(6, 0.0022045020810188567)	(7, 0.0011024584254653096)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.50359221643945e-05)	(145, 0.001297234376029083)	(150, 0.00223395074475401)
low_variance_R1	(1, 0.007539272686110962)	(2, 0.00646709246420433)	(3, 0.0054131621184152585)	(4, 0.004318999091185203)	(5, 0.0032405973206021312)	(6, 0.0021236219482251265)	(7, 0.001050197416583207)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.370865844675379e-05)	(145, 0.0012547619370645805)	(150, 0.002150581992489703)
low_variance_R2	(1, 0.007554619172846181)	(2, 0.0064596266057926005)	(3, 0.005367122658209597)	(4, 0.004290379967273576)	(5, 0.0032293985329845377)	(6, 0.002128599187166279)	(7, 0.0010597371245537495)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.2215486764408e-05)	(145, 0.001238668864488187)	(150, 0.0021277696473427535)
medium_variance_R1	(1, 0.007601073402963607)	(2, 0.006525989791674636)	(3, 0.005418554127268174)	(4, 0.0042949424363029655)	(5, 0.003213222506425792)	(6, 0.0021236219482251265)	(7, 0.0010667882130537159)	(8, 0.0)	(9, 0.0)	(10, 4.1476991176272e-07)	(15, 1.65907964705088e-07)	(20, 0.0)	(25, 1.65907964705088e-07)	(30, 4.97723894115264e-07)	(35, 7.465858411728959e-07)	(40, 3.31815929410176e-07)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 4.1476991176272e-07)	(95, 1.65907964705088e-07)	(100, 8.2953982352544e-08)	(105, 4.1476991176272e-07)	(110, 8.2953982352544e-08)	(115, 4.1476991176272e-07)	(120, 1.65907964705088e-07)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.412342835851651e-05)	(145, 0.0012438120113940445)	(150, 0.0021754681871954664)
medium_variance_R2	(1, 0.007629277756963472)	(2, 0.006542580588145145)	(3, 0.005434315383915157)	(4, 0.004350106834567408)	(5, 0.0032812447719548776)	(6, 0.0021543149216955676)	(7, 0.0010775722307595466)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 4.1476991176272e-07)	(40, 1.65907964705088e-07)	(45, 8.2953982352544e-08)	(50, 4.1476991176272e-07)	(55, 3.31815929410176e-07)	(60, 3.31815929410176e-07)	(65, 0.0)	(70, 8.2953982352544e-08)	(75, 4.1476991176272e-07)	(80, 8.2953982352544e-08)	(85, 4.1476991176272e-07)	(90, 4.97723894115264e-07)	(95, 2.48861947057632e-07)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 1.65907964705088e-07)	(125, 4.1476991176272e-07)	(130, 0.0)	(135, 0.0)	(140, 6.122003897617747e-05)	(145, 0.0012496187901587228)	(150, 0.002165513709313161)
only_high_error_zero_var_no_indels_R1	(1, 0.007626789137492896)	(2, 0.006564978163380332)	(3, 0.005480354844120819)	(4, 0.004338493277038051)	(5, 0.003227739453337487)	(6, 0.0021630250898425846)	(7, 0.0010721802219066311)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.204957879970291e-05)	(145, 0.0012347700273176174)	(150, 0.002144775213725025)
only_high_error_zero_var_no_indels_R2	(1, 0.007645039013610455)	(2, 0.006558756614703891)	(3, 0.005471229906062039)	(4, 0.004413566631067104)	(5, 0.003292858329484234)	(6, 0.002197036222607128)	(7, 0.0011016288856417842)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.312798057028597e-05)	(145, 0.0012329450397058615)	(150, 0.00215472969160733)
only_high_variance_zero_error_no_indels_R1	(1, 0.007594022314463641)	(2, 0.006506080835910025)	(3, 0.00539200885291536)	(4, 0.004304482144273508)	(5, 0.003238523471043318)	(6, 0.002155559231430856)	(7, 0.0010572485050831732)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.27961646408758e-05)	(145, 0.0012511949158234212)	(150, 0.0021592921606367202)
only_high_variance_zero_error_no_indels_R2	(1, 0.007572869048963742)	(2, 0.006533040880174602)	(3, 0.005408184879474106)	(4, 0.004345544365538017)	(5, 0.0032464040993668095)	(6, 0.0021543149216955676)	(7, 0.001102043655553547)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.420638234086905e-05)	(145, 0.0012863674043408998)	(150, 0.0022090645500482467)
only_low_error_zero_var_no_indels_R1	(1, 0.007649186712728082)	(2, 0.006542165818233383)	(3, 0.00543016768479753)	(4, 0.004359231772626187)	(5, 0.0032600915064549788)	(6, 0.002176297727018992)	(7, 0.0010763279210242583)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.204957879970291e-05)	(145, 0.0012581630503410348)	(150, 0.0021339911960191944)
only_low_error_zero_var_no_indels_R2	(1, 0.007548812394081504)	(2, 0.006493637738557144)	(3, 0.005392423622827123)	(4, 0.004300749215067644)	(5, 0.0032157111258963684)	(6, 0.002153900151783805)	(7, 0.0010763279210242583)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.2215486764408e-05)	(145, 0.001249950606088133)	(150, 0.002197036222607128)
only_low_variance_zero_error_no_indels_R1	(1, 0.0076056358719929955)	(2, 0.006524330712027585)	(3, 0.005467911746767938)	(4, 0.004369601020420255)	(5, 0.0032464040993668095)	(6, 0.0021572183110779063)	(7, 0.0010837937794359873)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.14689009232351e-05)	(145, 0.0012715186414997944)	(150, 0.0021966214526953653)
only_low_variance_zero_error_no_indels_R2	(1, 0.007509409252464045)	(2, 0.006463359534998466)	(3, 0.005404451950268242)	(4, 0.004338908046949814)	(5, 0.003272949373719623)	(6, 0.0021721500279013642)	(7, 0.001097481186524157)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 5.980982127618422e-05)	(145, 0.0012341893494411495)	(150, 0.002143116134077974)
only_medium_error_zero_var_no_indels_R1	(1, 0.007568306579934351)	(2, 0.006475802632351347)	(3, 0.005433071074179869)	(4, 0.004346788675273305)	(5, 0.0032708755241608097)	(6, 0.002192473753577738)	(7, 0.0010854528590830382)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.254730269381817e-05)	(145, 0.0012682834361880451)	(150, 0.0021733943376366525)
only_medium_error_zero_var_no_indels_R2	(1, 0.007561255491434386)	(2, 0.0064666776942925676)	(3, 0.005376662366180139)	(4, 0.0043082150734793725)	(5, 0.003249722258660911)	(6, 0.0021928885234895005)	(7, 0.0010908448679359537)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.910066729966915e-05)	(145, 0.0013193001353348599)	(150, 0.0022505415412245188)
only_medium_variance_zero_error_no_indels_R1	(1, 0.007536369296728622)	(2, 0.006453819827027923)	(3, 0.005381639605121292)	(4, 0.00428955042745005)	(5, 0.003217784975455182)	(6, 0.002144775213725025)	(7, 0.001087526708641852)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.304502658793344e-05)	(145, 0.0012268893989941258)	(150, 0.00215472969160733)
only_medium_variance_zero_error_no_indels_R2	(1, 0.0076773910667279465)	(2, 0.00657078494214501)	(3, 0.00545754249897387)	(4, 0.004354669303596797)	(5, 0.0032190292851904693)	(6, 0.002158047850901432)	(7, 0.0010759131511124955)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.437229030557414e-05)	(145, 0.0012707720556586215)	(150, 0.0022169451783717385)
reference_clean_R1	(1, 0.0074957218453758755)	(2, 0.006446353968616194)	(3, 0.005378736215738952)	(4, 0.004298260595597067)	(5, 0.0032157111258963684)	(6, 0.0021874965146365852)	(7, 0.0010941630272300552)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.138594694088255e-05)	(145, 0.0012200042184588645)	(150, 0.002124036718136889)
reference_clean_R2	(1, 0.007589874615346013)	(2, 0.0064807798712925)	(3, 0.005406525799827055)	(4, 0.004315680931891101)	(5, 0.003226495143602199)	(6, 0.002178786346489568)	(7, 0.0010709359121713429)	(8, 0.0)	(9, 0.0)	(10, 0.0)	(15, 0.0)	(20, 0.0)	(25, 0.0)	(30, 0.0)	(35, 0.0)	(40, 0.0)	(45, 0.0)	(50, 0.0)	(55, 0.0)	(60, 0.0)	(65, 0.0)	(70, 0.0)	(75, 0.0)	(80, 0.0)	(85, 0.0)	(90, 0.0)	(95, 0.0)	(100, 0.0)	(105, 0.0)	(110, 0.0)	(115, 0.0)	(120, 0.0)	(125, 0.0)	(130, 0.0)	(135, 0.0)	(140, 6.495296818204194e-05)	(145, 0.0012602368998998483)	(150, 0.002160121700460246)