Index of /~ckern/FAANG_Project/Pig_Ensembl

[ICO]NameLast modifiedSizeDescription
[PARENTDIR]Parent Directory  -  
[ ]slurm-17482024.out2017-11-14 13:21 1.1K 
[ ]slurm-17482022.out2017-11-14 13:21 1.1K 
[ ]slurm-17482020.out2017-11-14 13:21 1.1K 
[ ]slurm-17482023.out2017-11-14 13:21 1.6K 
[ ]slurm-17482025.out2017-11-14 13:21 1.6K 
[TXT]corr_Lung_P350.txt2017-11-14 13:21 172  
[TXT]corr_Spleen_P350.txt2017-11-14 13:21 172  
[ ]temp_Lung_P3482017-11-14 13:21 18M 
[ ]temp_Lung_P3502017-11-14 13:21 17M 
[ ]temp_Spleen_P3482017-11-14 13:20 16M 
[ ]slurm-17482021.out2017-11-14 13:20 1.6K 
[ ]temp_Spleen_P3502017-11-14 13:20 14M 
[TXT]corr_Liver_P350.txt2017-11-14 13:20 172  
[ ]temp_Liver_P3482017-11-14 13:20 7.8M 
[ ]temp_Liver_P3502017-11-14 13:20 7.5M 
[ ]slurm-17482015.out2017-11-14 13:20 1.1K 
[ ]slurm-17482017.out2017-11-14 13:20 1.1K 
[ ]slurm-17482013.out2017-11-14 13:20 1.1K 
[ ]slurm-17482016.out2017-11-14 13:19 1.6K 
[ ]slurm-17482018.out2017-11-14 13:19 1.6K 
[ ]slurm-17482014.out2017-11-14 13:19 1.6K 
[TXT]corr_Lung_P348.txt2017-11-14 13:19 0  
[TXT]corr_Spleen_P348.txt2017-11-14 13:19 0  
[TXT]corr_Liver_P348.txt2017-11-14 13:19 0  
[TXT]corr.sh2017-11-14 13:19 219  
[TXT]test_signal_corr.py2017-11-14 13:12 702  
[ ]temp2017-11-14 12:43 7.8M 
[TXT]convert_tss.py2017-11-14 12:42 451  
[DIR]StringTie/2017-11-14 12:42 -  
[ ]slurm-17387302.out2017-10-30 21:45 53K 
[DIR]IDR/2017-10-30 21:44 -  
[DIR]Logs/2017-10-30 21:34 -  
[ ]slurm-17386811.out2017-10-30 21:08 34K 
[DIR]Macs2/2017-10-30 21:06 -  
[DIR]DeepTools/2017-10-30 21:00 -  
[DIR]Figures/2017-10-30 20:57 -  
[DIR]Metrics/2017-10-30 20:56 -  
[DIR]Tables/2017-10-30 20:56 -  
[ ]config.yaml2017-10-30 20:56 397  
[ ]slurm-17375425.out2017-10-25 18:52 35K 
[DIR]Peak_Calls/2017-10-25 18:48 -  
[ ]slurm-17375424.out2017-10-25 17:29 32K 
[ ]slurm-17375423.out2017-10-25 17:27 937  
[TXT]output.txt2017-10-16 13:03 84  
[IMG]output.png2017-10-16 13:03 45K 
[IMG]input_spearman.png2017-10-04 13:01 79K 
[IMG]input_pearson.png2017-10-04 13:01 79K 
[ ]inputs.npz2017-10-04 11:55 4.6M 
[ ]Lung_ST6GAL1_Enhancers.fa2017-07-31 10:00 971  
[DIR]Enhancers/2017-07-30 12:03 -  
[DIR]Genome/2017-07-24 13:25 -  
[ ]slurm-13576666.out2017-07-12 16:00 8.7K 
[ ]slurm-13576667.out2017-07-12 15:59 8.7K 
[DIR]ChromHMM/2017-07-11 19:27 -  
[DIR]ChromHMM2/2017-07-11 16:09 -  
[TXT]test.py2017-06-22 13:08 299  
[TXT]genes_with_h3k4me3_liver_p348.txt2017-06-22 13:06 226K 
[ ]slurm-12837415.out2017-06-15 12:12 18K 
[DIR]Results/2017-06-15 12:12 -  
[ ]slurm-12833122.out2017-06-14 17:04 126K 
[DIR]Aligned_Reads/2017-06-14 16:33 -  
[ ]slurm-12833000.out2017-06-14 14:42 12K 
[TXT]pipeline-config.txt2017-06-14 14:10 433  
[TXT]peakexpcorr.py2017-06-12 11:54 641  
[DIR]Raw_Reads/2017-06-09 15:03 -  
[DIR]Test_GC/2017-06-08 15:02 -  
[IMG]plot2.png2017-06-07 21:15 53K 
[IMG]plot.png2017-06-07 20:41 52K 
[ ]slurm-12667870.out2017-06-07 17:10 110K 
[IMG]Liver_P348_Enrichment.png2017-06-07 15:56 106K 
[DIR]Old_Peak_Calls/2017-06-02 14:42 -  
[TXT]peaksizes.txt2017-06-02 12:46 226K 
[ ]H3K4me32017-05-31 14:59 0  
[ ]hoxb5primer.bed2017-05-04 14:11 31  
[ ]hoxc4primer.bed2017-05-04 14:07 30  
[ ]trx1primer.bed2017-05-04 14:05 31  
[ ]gapdhprimer.bed2017-05-04 14:03 30  
[ ]01270341402.group2017-03-10 13:39 768K 
[ ]01270341402.seq2017-03-10 13:39 34M 
[TXT]H3K4me3_Liver_Motifs.txt2017-03-10 13:38 0  
[TXT]run.sh2017-03-10 13:38 277  
[ ]01736883185.group2017-03-10 13:30 768K 
[ ]01736883185.seq2017-03-10 13:30 34M 
[ ]H3K4me3_Liver_Seqs.fa2017-03-10 10:53 34M 
[TXT]test.sh2017-02-28 16:47 19  
[IMG]lung.png2017-02-24 10:40 8.7K 
[IMG]spleen.png2017-02-24 10:39 8.7K 
[IMG]macs2_spleen.png2017-02-24 10:38 8.6K 
[IMG]macs2_lung.png2017-02-24 10:38 8.7K 
[IMG]macs2_liver.png2017-02-24 10:37 9.2K 
[TXT]Macs2_All_Both.txt2017-02-24 10:34 4.9K 
[TXT]Macs2_All_H3K4me3.txt2017-02-24 10:32 178K 
[TXT]Macs2_All_H3K27me3.txt2017-02-24 10:32 4.3K 
[TXT]Macs2_Both_Spleen_Promoters.txt2017-02-24 10:31 16K 
[TXT]Macs2_Both_Lung_Promoters.txt2017-02-24 10:30 27K 
[TXT]Macs2_Both_Liver_Promoters.txt2017-02-24 10:30 21K 
[TXT]Macs2_Only_H3K27me3_Liver_Promoters.txt2017-02-24 10:28 37K 
[TXT]Macs2_Only_H3K27me3_Lung_Promoters.txt2017-02-24 10:28 34K 
[TXT]Macs2_Only_H3K27me3_Spleen_Promoters.txt2017-02-24 10:28 22K 
[TXT]Macs2_Only_H3K4me3_Spleen_Promoters.txt2017-02-24 10:27 156K 
[TXT]Macs2_Only_H3K4me3_Lung_Promoters.txt2017-02-24 10:27 147K 
[TXT]Macs2_Only_H3K4me3_Liver_Promoters.txt2017-02-24 10:27 157K 
[TXT]diffsets.py2017-02-24 10:25 220  
[TXT]Only_Macs2_H3K27me3_Liver_Promoters.txt2017-02-24 10:17 194K 
[TXT]Macs2_H3K27me3_Liver_Promoters.txt2017-02-24 10:15 58K 
[TXT]Macs2_H3K27me3_Lung_Promoters.txt2017-02-24 10:15 60K 
[TXT]Macs2_H3K27me3_Spleen_Promoters.txt2017-02-24 10:15 37K 
[DIR]Bed_Files/2017-02-22 20:20 -  
[DIR]Cufflinks_Output/2017-02-22 15:24 -  
[IMG]liver.png2017-02-22 14:32 9.2K 
[ ]sicer_H3K27me3_Lung_Combined.bed2017-02-21 13:52 0  
[ ]sicer_H3K27me3_Liver_Combined.bed2017-02-21 13:51 1.6M 
[ ]test2017-02-21 13:50 1.7M 
[DIR]Gene_Expression/2017-02-21 13:45 -  
[TXT]H3K27me3_Liver_Specific_Promoters.txt2017-02-21 11:03 16K 
[TXT]H3K27me3_Lung_Specific_Promoters.txt2017-02-21 11:03 8.7K 
[TXT]H3K27me3_Spleen_Specific_Promoters.txt2017-02-21 11:03 18K 
[TXT]H3K4me3_Spleen_Specific_Promoters.txt2017-02-21 11:02 6.3K 
[TXT]H3K4me3_Lung_Specific_Promoters.txt2017-02-21 11:01 4.8K 
[TXT]H3K4me3_Liver_Specific_Promoters.txt2017-02-21 11:00 15K 
[TXT]tissuespecificpromoters.py2017-02-21 10:56 128  
[TXT]Both_All_Promoters.txt2017-02-21 10:51 37K 
[TXT]Only_H3K27me3_All_Promoters.txt2017-02-21 10:50 46K 
[TXT]Only_H3K4me3_All_Promoters.txt2017-02-21 10:50 153K 
[TXT]Only_H3K27me3_Liver_Promoters.txt2017-02-21 10:46 76K 
[TXT]Only_H3K27me3_Lung_Promoters.txt2017-02-21 10:45 64K 
[TXT]Only_H3K27me3_Spleen_Promoters.txt2017-02-21 10:45 76K 
[TXT]Only_H3K4me3_Spleen_Promoters.txt2017-02-21 10:45 125K 
[TXT]Only_H3K4me3_Lung_Promoters.txt2017-02-21 10:44 127K 
[TXT]Only_H3K4me3_Liver_Promoters.txt2017-02-21 10:44 138K 
[TXT]Both_Spleen_Promoters.txt2017-02-21 10:40 47K 
[TXT]Both_Lung_Promoters.txt2017-02-21 10:40 46K 
[TXT]Both_Liver_Promoters.txt2017-02-21 10:40 40K 
[TXT]H3K27me3_Lung_Promoters.txt2017-02-21 10:39 111K 
[TXT]H3K27me3_Liver_Promoters.txt2017-02-21 10:39 116K 
[TXT]H3K27me3_Spleen_Promoters.txt2017-02-21 10:38 123K 
[TXT]H3K4me3_Spleen_Promoters.txt2017-02-21 10:26 172K 
[TXT]H3K4me3_Lung_Promoters.txt2017-02-21 10:26 173K 
[TXT]H3K4me3_Liver_Promoters.txt2017-02-21 10:26 178K 
[ ]promoters.bed2017-02-21 10:23 1.0M 
[TXT]runsicer.sh2017-02-20 13:38 363  
[DIR]Tophat_Output/2017-02-17 16:31 -  
[DIR]Temp_Files/2017-02-17 16:30 -  
[DIR]tophat_out/2017-02-17 16:29 -  
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